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Tools

Haab Laboratory

MotifFinder

MotifFinder enables the automated analysis of glycan array data. The program provides information about the binding determinants of lectins and glycosidases that were incubated on the arrays. Full descriptions and instructions are provided in the download material.

MotifFinder Request Form

Please fill out the form below to request the MotifFinder software.
  • Name * Required
  • For which purpose do you plan to use MotiFinder? * Required
  • This field is for validation purposes and should be left unchanged.

SignalFinder-Microarray

SignalFinder-Microarray (SignalFinderMA) enables the automated analysis of microarray images. SignalFinderMA automatically detects individual spots within a microarray and outputs statistics for each spot and for replicate spots. The program can accommodate multiple arrays within a single image. Full descriptions and instructions are provided in the download material.

SignalFinder-Microarray

Please fill out the form below to request the SignalFinder-Microarray software.
  • Name * Required
  • For which purpose do you plan to use SignalFinder-Microarray? * Required
  • This field is for validation purposes and should be left unchanged.

SignalFinderIF

SignalFinderIF is the core of the SignalFinder Suite. SignalFInderIF enables the automated analysis of pathology tissues stained with immunofluorescence and imaged with a microscope or digital pathology platform. SignalFinderIF implements the Segment Fit Thresholding (SFT) algorithm to determine and quantify signal objectively from immunofluorescence images. The software provides the ability to select as many channels as are available from the image file as well as multiple thresholds selected as multipliers of the base threshold with user selection of channels, thresholds and multiplier. SignalFinder also allows selection of multiple tissues and provides automated tissue detection for tissue selection from tissue microarrays (TMAs). The software supports multiple image formats and can be quickly adapted to most image formats, upon request.

SignalFinderIF

Please fill out the form below to request the SignalFinderIF software.
  • Name * Required
  • For which purpose do you plan to use SignalFinderIF? * Required
  • This field is for validation purposes and should be left unchanged.